The behavioral ecology is not only a science to study the Clustering Behaviors of animals and biology, but also provides a new perspective, a new theory, and a new method to probe into clustering behaviors of the human beings, the social and the economical fields. The paper first analyses the development tendency of the innovative clustering of enterprises, the innovative clustering behaviors of enterprises and their features of the behavioral ecology. Based on it, the paper introduces the behavioral ecology into the study of the innovative clustering behaviors of enterprises. It thus sets up a conception of a system analytic framework to the behavioral ecology of the innovative clustering behaviors of enterprises. The paper pays much attention to the introductory research of the present situation, clues of thoughts, and the contents of innovative clustering behaviors of enterprises.